I realized after my latest video that I had "hide mouse" checked in my recording software, so in my future videos the mouse will be visible.  
 
Actually, I have a recording of an RTS battle with the mouse and everything works fine in it. I haven't uploaded it yet, it's video 10 in the series, so at the rate I'm going it'll be up in a few days. I'll post a link here when it's up. 
 
Seriously though, Bandicam works well for me. You might want to give it a shot.  
Or based on whatever software you're using you might want to fiddle with some of the settings. I set mine to specifically record only 1024 by 768...maybe that helps.
		 
		
		
		
		
		
		
		
		
	
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