Nice tool von Pilsen
I hope you are aware that the IL2DCE is open source and you could have also set the different skill values directly into the mission generating process. In case the monitoring doesn't work reliable it would also be possible to call your application after the mission file was written to ensure the mission gets modified. But as it seems to work prefect already there is no need for this.
I will consider to set your skill values as default for the next release.